Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | CK234_00696 | Not Available | Negative | 889120 - 889389 | 10364.5 |
| hypothetical protein | CK234_00697 | Not Available | Negative | 889670 - 889921 | 10083.2 |
| putative typa/bipa-like gtp-binding protein | CK234_00698 | Not Available | Positive | 890160 - 891962 | 67346.3 |
| nadph-flavin oxidoreductase | CK234_00699 | Not Available | Negative | 892023 - 892655 | 23160.0 |
| phosphoenolpyruvate carboxykinase (atp) | CK234_00700 | Not Available | Negative | 892779 - 894386 | 59121.2 |
| uracil phosphoribosyltransferase | CK234_00701 | Not Available | Positive | 894647 - 895306 | 24410.4 |
| putative 2-oxoglutarate oxidoreductase subunit, korb-like | CK234_00702 | Not Available | Negative | 895464 - 896468 | 36538.8 |
| putative 2-oxoglutarate oxidoreductase subunit, kora-like | CK234_00703 | Not Available | Negative | 896492 - 898339 | 66247.6 |
| Trna-arg | Not Available | Not Available | Positive | 898749 - 898823 | Not Available |
| 2-amino-3-ketobutyrate coenzyme a ligase | CK234_00705 | Not Available | Negative | 898891 - 900081 | 43568.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

