Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine-phosphate decarboxylase involved in protein o-glycosylation | CK234_00686 | Not Available | Positive | 877387 - 879192 | 70210.3 |
| opine dehydrogenase involved in protein o-glycosylation | CK234_00687 | Not Available | Positive | 879189 - 880289 | 41186.0 |
| licd family protein involved in protein o-glycosylation | CK234_00688 | Not Available | Positive | 880293 - 881090 | 31802.5 |
| uncharacterized protein involved in protein o-glycosylation | CK234_00689 | Not Available | Positive | 881104 - 882120 | 40425.5 |
| sugar transferase, pep-cterm/epsh1 system associated involved in protein o-glycosylation | CK234_00690 | Not Available | Positive | 882093 - 883208 | 42944.4 |
| spore coat protein sa involved in protein o-glycosylation | CK234_00691 | Not Available | Positive | 883221 - 884483 | 47669.5 |
| putative glycosyltransferase involved in protein o-glycosylation | CK234_00692 | Not Available | Positive | 884476 - 885222 | 28692.4 |
| putative bacterial membrane protein, yfho-like | CK234_00693 | Not Available | Negative | 885248 - 887740 | 93092.5 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CK234_00694 | Not Available | Positive | 887825 - 888520 | 25510.5 |
| s-ribosylhomocysteine lyase | CK234_00695 | Not Available | Positive | 888532 - 889017 | 18487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

