Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | CK234_00676 | Not Available | Negative | 865391 - 865813 | 15666.9 |
| putative tyrosine recombinase, xerd-like | CK234_00677 | Not Available | Positive | 865880 - 866821 | 36166.1 |
| putative type iv pilus biogenesis/stability protein, pilw-like | CK234_00678 | Not Available | Positive | 866963 - 868639 | 60893.8 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_00679 | Not Available | Positive | 868793 - 869860 | 40487.2 |
| putative competence protein, comm-like | CK234_00680 | Not Available | Positive | 869865 - 871403 | 56291.0 |
| hypothetical protein | CK234_00681 | Not Available | Negative | 871405 - 871572 | 6591.64 |
| methionine--trna ligase | CK234_00682 | Not Available | Positive | 871859 - 873901 | 77707.8 |
| putative oligosaccharide repeat unit flippase involved in protein o-glycosylation | CK234_00683 | Not Available | Positive | 873983 - 875419 | 53599.5 |
| acyltransferase family protein involved in protein o-glycosylation | CK234_00684 | Not Available | Positive | 875419 - 876444 | 39474.2 |
| uncharacterized protein involved in protein o-glycosylation | CK234_00685 | Not Available | Negative | 876467 - 877297 | 31892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

