Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-farnesyl-diphosphate specific) | CK234_00666 | Not Available | Positive | 854838 - 855569 | 28066.4 |
| putative outer membrane protein assembly factor, bama precursor-like | CK234_00667 | Not Available | Positive | 855581 - 858223 | 100747.0 |
| skp precursor-like chaperone protein | CK234_00668 | Not Available | Positive | 858244 - 858759 | 18967.6 |
| omph-like outer membrane protein | CK234_00669 | Not Available | Positive | 858817 - 859320 | 19260.2 |
| glutamate racemase | CK234_00670 | Not Available | Positive | 859396 - 860268 | 32418.3 |
| pyridoxine kinase | CK234_00671 | Not Available | Positive | 860325 - 861197 | 32647.3 |
| putative lipoprotein-releasing system transmembrane protein, lole-like | CK234_00672 | Not Available | Negative | 861584 - 862822 | 45679.9 |
| ribosome-binding factor a | CK234_00673 | Not Available | Negative | 862832 - 863167 | 12972.9 |
| putative o-methyltransferase | CK234_00674 | Not Available | Negative | 863241 - 863879 | 24383.5 |
| pyruvate kinase | CK234_00675 | Not Available | Negative | 863895 - 865358 | 54241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

