Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein, histone-like | CK234_00035 | Not Available | Positive | 45824 - 46252 | 15637.0 |
| n-acetylmuramoyl-l-alanine amidase | CK234_00036 | Not Available | Positive | 46395 - 46844 | 16859.2 |
| tyrosine-protein kinase wzc | CK234_00037 | Not Available | Negative | 46953 - 49364 | 89900.0 |
| putative polysaccharide export protein, epse-like | CK234_00038 | Not Available | Negative | 49373 - 50164 | 28967.2 |
| udp-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | CK234_00039 | Not Available | Negative | 50212 - 51615 | 54484.1 |
| putative tyrosine recombinase, xerd-like | CK234_00040 | Not Available | Negative | 52056 - 52997 | 36543.2 |
| mfa1/mfa2-like fimbrillin-a associated anchor protein | CK234_00041 | Not Available | Negative | 53081 - 54028 | 35988.7 |
| mfa1/mfa2-like fimbrillin-a associated anchor protein | CK234_00042 | Not Available | Negative | 54052 - 55590 | 55438.3 |
| protein of unknown function (duf3868) | CK234_00043 | Not Available | Negative | 55621 - 57030 | 54370.8 |
| protein of unknown function (duf3575) | CK234_00044 | Not Available | Negative | 57037 - 57609 | 21537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

