Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-glycosyl hydrolase family 30 protein | CK234_00646 | Not Available | Positive | 833654 - 835219 | 59563.2 |
| putative hth-type transcriptional repressor, cytr-like | CK234_00647 | Not Available | Negative | 835300 - 836322 | 38256.6 |
| alkyl hydroperoxide reductase subunit f | CK234_00648 | Not Available | Negative | 836462 - 838012 | 55958.4 |
| alkyl hydroperoxide reductase subunit c | CK234_00649 | Not Available | Negative | 838025 - 838591 | 21111.1 |
| putative magnesium transport protein, cora-like | CK234_00650 | Not Available | Positive | 839098 - 840021 | 35626.5 |
| putative pepsy-like tm region protein | CK234_00651 | Not Available | Negative | 840115 - 841311 | 45293.5 |
| protein of unknown function (duf4374) | CK234_00652 | Not Available | Negative | 841328 - 842728 | 51082.5 |
| putative vitamin b12 transporter, btub precursor-like | CK234_00653 | Not Available | Negative | 842786 - 845086 | 86518.3 |
| dna-3-methyladenine glycosylase 1 | CK234_00654 | Not Available | Positive | 845355 - 845975 | 23949.9 |
| Trna-leu | Not Available | Not Available | Positive | 846325 - 846412 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

