Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | CK234_00636 | Not Available | Positive | 812554 - 813366 | 31029.0 |
| putative alpha-1,2-mannosidase | CK234_00637 | Not Available | Positive | 813386 - 815719 | 88755.1 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_00638 | Not Available | Positive | 815745 - 817157 | 52158.1 |
| putative alpha-1,2-mannosidase | CK234_00639 | Not Available | Positive | 817160 - 819442 | 86313.1 |
| histidine phosphatase superfamily (branch 2) | CK234_00640 | Not Available | Positive | 819449 - 821188 | 66792.9 |
| putative sensor histidine kinase, tods-like | CK234_00641 | Not Available | Negative | 821436 - 825476 | 153033.0 |
| hypothetical protein | CK234_00642 | Not Available | Positive | 825690 - 827189 | 56154.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00643 | Not Available | Positive | 827212 - 830250 | 112371.0 |
| susd family protein | CK234_00644 | Not Available | Positive | 830295 - 831926 | 62015.5 |
| putative glucuronoxylanase, xync precursor-like | CK234_00645 | Not Available | Positive | 832043 - 833641 | 59513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

