Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cocaine esterase | CK234_00626 | Not Available | Positive | 789874 - 791781 | 73968.0 |
| protein of unknown function (duf4954) | CK234_00627 | Not Available | Negative | 791929 - 793914 | 74478.4 |
| putative gtpase, hflx-like | CK234_00628 | Not Available | Negative | 793928 - 795181 | 47657.5 |
| starch-binding associating with outer membrane | CK234_00629 | Not Available | Negative | 795273 - 796859 | 58810.6 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00630 | Not Available | Negative | 796883 - 799855 | 110303.0 |
| putative sensor histidine kinase, tods-like | CK234_00631 | Not Available | Positive | 800027 - 804247 | 162680.0 |
| alpha-n-acetylglucosaminidase (naglu) tim-barrel domain protein | CK234_00632 | Not Available | Positive | 804330 - 806594 | 87240.9 |
| protein of unknown function (duf1624) | CK234_00633 | Not Available | Positive | 806602 - 807720 | 41642.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00634 | Not Available | Positive | 807796 - 810819 | 111949.0 |
| susd family protein | CK234_00635 | Not Available | Positive | 810840 - 812480 | 61732.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

