Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aaa-atpase | CK234_00616 | Not Available | Negative | 773913 - 775493 | 61216.9 |
| ribosome-recycling factor | CK234_00617 | Not Available | Positive | 775732 - 776292 | 20738.2 |
| putative ribosome biogenesis gtpase, rsga-like | CK234_00618 | Not Available | Positive | 776413 - 777345 | 35068.7 |
| aminopeptidase s | CK234_00619 | Not Available | Positive | 777359 - 778378 | 38292.7 |
| putative toluene efflux pump periplasmic linker protein, ttgg precursor-like | CK234_00620 | Not Available | Positive | 778465 - 779541 | 39714.1 |
| putative multidrug resistance protein, mdtb-like | CK234_00621 | Not Available | Positive | 779561 - 782596 | 112044.0 |
| putative outer membrane efflux protein, bepc precursor-like | CK234_00622 | Not Available | Positive | 782593 - 783912 | 50562.7 |
| putative amino acid permease, yhdg-like | CK234_00623 | Not Available | Positive | 784001 - 785659 | 59812.5 |
| alpha-n-acetylglucosaminidase (naglu) tim-barrel domain protein | CK234_00624 | Not Available | Negative | 785833 - 787986 | 82486.1 |
| fumarate hydratase class i, anaerobic | CK234_00625 | Not Available | Negative | 788092 - 789735 | 60487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

