Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| immunity protein 17 | CK234_00596 | Not Available | Positive | 751575 - 751790 | 8124.18 |
| plasmid pria4b orf-3-like protein | CK234_00597 | Not Available | Negative | 751905 - 753464 | 61127.4 |
| hypothetical protein | CK234_00598 | Not Available | Negative | 753644 - 753979 | 12878.8 |
| thioredoxin c-1 | CK234_00599 | Not Available | Negative | 754015 - 754329 | 11454.8 |
| dna polymerase iii subunit alpha | CK234_00600 | Not Available | Negative | 754371 - 758168 | 143946.0 |
| phosphatidylserine decarboxylase precursor-related protein | CK234_00601 | Not Available | Positive | 758360 - 759046 | 25956.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CK234_00602 | Not Available | Positive | 759058 - 759765 | 26073.4 |
| protein of unknown function (duf4834) | CK234_00603 | Not Available | Positive | 759818 - 760120 | 11511.5 |
| pp_00594 | CK234_00604 | Not Available | Negative | 760124 - 760558 | Not Available |
| hypothetical protein | CK234_00605 | Not Available | Negative | 760560 - 760835 | 11043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

