Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | CK234_00566 | Not Available | Positive | 718801 - 719640 | 30824.3 |
| nigd-like c-terminal beta sandwich domain protein | CK234_00567 | Not Available | Negative | 719632 - 720366 | 27504.9 |
| lipid-a-disaccharide synthase | CK234_00568 | Not Available | Negative | 720423 - 721562 | 43067.6 |
| putative 5'-nucleotidase, sure-like | CK234_00569 | Not Available | Negative | 721559 - 722332 | 28332.7 |
| soj-like sporulation initiation inhibitor protein | CK234_00570 | Not Available | Positive | 722590 - 723357 | 28003.1 |
| putative chromosome-partitioning protein, parb-like | CK234_00571 | Not Available | Positive | 723361 - 724257 | 33345.2 |
| hypothetical protein | CK234_00572 | Not Available | Positive | 724327 - 725034 | 26895.4 |
| membrane-bound lytic murein transglycosylase d precursor | CK234_00573 | Not Available | Positive | 725039 - 726301 | 47706.3 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | CK234_00574 | Not Available | Positive | 726403 - 728673 | 86308.0 |
| putative hth-type transcriptional repressor, ycge-like | CK234_00575 | Not Available | Negative | 728765 - 729112 | 13742.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

