Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme f420 hydrogenase, subunit gamma | CK234_00025 | Not Available | Negative | 34135 - 35253 | 42912.4 |
| n, n'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-n-acetylgalactosaminyltransferase | CK234_00026 | Not Available | Negative | 35262 - 36476 | 46546.8 |
| putative o-antigen transporter | CK234_00027 | Not Available | Negative | 36587 - 38026 | 55112.6 |
| general stress protein a | CK234_00028 | Not Available | Negative | 38023 - 38982 | 37147.3 |
| hypothetical protein | CK234_00029 | Not Available | Negative | 38948 - 40375 | 55063.9 |
| hypothetical protein | CK234_00030 | Not Available | Negative | 41284 - 41574 | 10799.2 |
| putative transcriptional activator, rfah-like | CK234_00031 | Not Available | Negative | 41642 - 42142 | 19034.7 |
| hypothetical protein | CK234_00032 | Not Available | Positive | 42420 - 42617 | 7987.94 |
| protein of unknown function (duf3987) | CK234_00033 | Not Available | Positive | 42816 - 45194 | 89845.2 |
| protein of unknown function (duf4248) | CK234_00034 | Not Available | Negative | 45345 - 45575 | 8949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

