Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| y4mf family transcriptional regulator | CK234_00556 | Not Available | Negative | 707213 - 707428 | 7860.67 |
| guanine deaminase | CK234_00557 | Not Available | Positive | 708341 - 708808 | 16967.2 |
| cytosol non-specific dipeptidase | CK234_00558 | Not Available | Negative | 708870 - 710330 | 53173.6 |
| hypothetical protein | CK234_00559 | Not Available | Negative | 710327 - 711331 | 37225.6 |
| ribosomal rna small subunit methyltransferase a | CK234_00560 | Not Available | Positive | 711430 - 712272 | 31940.9 |
| putative magnesium transporter, mgte-like | CK234_00561 | Not Available | Positive | 712304 - 713644 | 49694.8 |
| protein of unknown function (duf349) | CK234_00562 | Not Available | Positive | 713905 - 715713 | 70097.0 |
| Trna-gln | Not Available | Not Available | Positive | 715868 - 715938 | Not Available |
| putative ribosomal silencing factor, rsfs-like | CK234_00564 | Not Available | Positive | 716259 - 716618 | 13409.9 |
| putative atp-dependent zinc metalloprotease, ftsh-like | CK234_00565 | Not Available | Positive | 716672 - 718642 | 73288.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

