Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative deoxyribonuclease, ycfh-like | CK234_00546 | Not Available | Negative | 692844 - 693617 | 29324.4 |
| (2e,6e)-farnesyl diphosphate synthase | CK234_00547 | Not Available | Negative | 693619 - 694596 | 36812.8 |
| tonb family c-terminal domain protein | CK234_00548 | Not Available | Negative | 694678 - 695361 | 25649.9 |
| cytidylate kinase | CK234_00549 | Not Available | Positive | 695547 - 696236 | 25702.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CK234_00550 | Not Available | Positive | 696229 - 697095 | 32600.1 |
| 6-phosphofructokinase isozyme 1 | CK234_00551 | Not Available | Positive | 697177 - 698157 | 35428.5 |
| putative gtpase | CK234_00552 | Not Available | Negative | 698248 - 699345 | 40361.6 |
| protein of unknown function (duf1573) | CK234_00553 | Not Available | Negative | 699348 - 700424 | 39188.1 |
| hypothetical protein | CK234_00554 | Not Available | Positive | 700555 - 700986 | 17029.8 |
| alpha-2-macroglobulin family protein | CK234_00555 | Not Available | Negative | 701047 - 706725 | 213446.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

