Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | CK234_00536 | Not Available | Positive | 687020 - 687514 | 18849.7 |
| putative regulatory protein, asnc-like | CK234_00537 | Not Available | Negative | 687518 - 687994 | 17875.6 |
| iga peptidase m64 | CK234_00538 | Not Available | Positive | 688023 - 689408 | 52143.5 |
| ribosomal-protein-alanine acetyltransferase | CK234_00539 | Not Available | Positive | 689443 - 689979 | 21182.4 |
| hypothetical protein | CK234_00540 | Not Available | Negative | 689890 - 690105 | 8440.52 |
| exbd/tolr-like biopolymer transport protein | CK234_00541 | Not Available | Negative | 690161 - 690625 | 17906.9 |
| exbd/tolr-like biopolymer transport protein | CK234_00542 | Not Available | Negative | 690625 - 691215 | 22472.8 |
| hypothetical protein | CK234_00543 | Not Available | Negative | 691259 - 691720 | 16708.9 |
| tolq protein | CK234_00544 | Not Available | Negative | 691728 - 692501 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 692589 - 692676 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

