Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase | CK234_00526 | Not Available | Negative | 674414 - 676657 | 81126.7 |
| putative dna helicase | CK234_00527 | Not Available | Positive | 676829 - 678721 | 72789.6 |
| fluoroacetyl-coa thioesterase | CK234_00528 | Not Available | Negative | 678905 - 679276 | 12916.5 |
| putative beta-lactamase-inhibitor-like, pepsy-like | CK234_00529 | Not Available | Negative | 679512 - 680378 | 33226.6 |
| dna topoisomerase 3 | CK234_00530 | Not Available | Positive | 680652 - 682793 | 79816.9 |
| ribosomal rna small subunit methyltransferase f | CK234_00531 | Not Available | Negative | 682930 - 684357 | 53427.1 |
| hypothetical protein | CK234_00532 | Not Available | Positive | 684489 - 685196 | 25992.5 |
| putative ecf rna polymerase sigma factor, sigw-like | CK234_00533 | Not Available | Positive | 685199 - 685747 | 21091.3 |
| protein of unknown function (duf5056) | CK234_00534 | Not Available | Positive | 685731 - 686060 | 12325.1 |
| thymidylate synthase | CK234_00535 | Not Available | Positive | 686142 - 686936 | 30479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

