Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4435) | CK234_00516 | Not Available | Negative | 664338 - 665333 | 39179.5 |
| putative bacteriocin export abc transporter | CK234_00517 | Not Available | Negative | 665355 - 666176 | 31108.5 |
| carboxylate/amino acid/amine transporter | CK234_00518 | Not Available | Positive | 666259 - 667185 | 33083.5 |
| fatty acyl-coa reductase | CK234_00519 | Not Available | Negative | 667293 - 668153 | 31842.1 |
| nadph dehydrogenase | CK234_00520 | Not Available | Negative | 668150 - 669376 | 45663.6 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | CK234_00521 | Not Available | Negative | 669436 - 670200 | 29496.6 |
| ribosomal-protein-alanine acetyltransferase | CK234_00522 | Not Available | Positive | 670770 - 671231 | 17839.6 |
| hypothetical protein | CK234_00523 | Not Available | Positive | 671426 - 672097 | 26352.8 |
| citrate synthase | CK234_00524 | Not Available | Negative | 671909 - 673252 | 51048.6 |
| isocitrate dehydrogenase (nadp) | CK234_00525 | Not Available | Negative | 673265 - 674410 | 41576.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

