Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_00506 | Not Available | Positive | 651231 - 654548 | 122594.0 |
| susd family protein | CK234_00507 | Not Available | Positive | 654569 - 656059 | 55759.7 |
| thioredoxin | CK234_00508 | Not Available | Positive | 656078 - 657244 | 44545.2 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_00509 | Not Available | Positive | 657246 - 658595 | 50445.2 |
| glutaconyl-coa decarboxylase subunit beta | CK234_00510 | Not Available | Negative | 658791 - 660026 | 44261.9 |
| 2-oxoglutarate carboxylase large subunit | CK234_00511 | Not Available | Negative | 660026 - 661888 | 68971.7 |
| sodium pump decarboxylase, gamma subunit | CK234_00512 | Not Available | Negative | 661919 - 662170 | 8725.21 |
| albonoursin synthase | CK234_00513 | Not Available | Negative | 662438 - 662938 | 18878.7 |
| phosphoglycolate phosphatase | CK234_00514 | Not Available | Positive | 663001 - 663654 | 24293.1 |
| doxx-like protein | CK234_00515 | Not Available | Positive | 663892 - 664332 | 16186.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

