Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | CK234_00496 | Not Available | Positive | 639725 - 640579 | 31713.2 |
| hypothetical protein | CK234_00497 | Not Available | Positive | 640637 - 641626 | 37752.0 |
| ribosomal rna small subunit methyltransferase i | CK234_00498 | Not Available | Negative | 641642 - 642349 | 26154.2 |
| putative gliding motility-associated lipoprotein, gldb-like | CK234_00499 | Not Available | Negative | 642370 - 643371 | 38875.2 |
| putative enoyl-(acyl-carrier-protein) reductase (nadh), fabi-like | CK234_00500 | Not Available | Negative | 643379 - 644236 | 31326.5 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_00501 | Not Available | Positive | 644613 - 646232 | 59176.8 |
| protein of unknown function (duf4861) | CK234_00502 | Not Available | Positive | 646371 - 647585 | 45671.0 |
| beta-xylosidase | CK234_00503 | Not Available | Positive | 647599 - 649263 | 61567.8 |
| putative ecf rna polymerase sigma factor, sigl-like | CK234_00504 | Not Available | Positive | 649346 - 649948 | 23860.5 |
| protein of unknown function (duf4974) | CK234_00505 | Not Available | Positive | 650015 - 651175 | 44078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

