Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf rna polymerase sigma-e factor | CK234_00486 | Not Available | Negative | 627844 - 628395 | 22089.7 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00487 | Not Available | Negative | 628447 - 629724 | 49688.8 |
| hypothetical protein | CK234_00488 | Not Available | Negative | 629885 - 630040 | 5997.27 |
| hflc protein | CK234_00489 | Not Available | Negative | 630088 - 631038 | 35395.3 |
| helicase, putative, recd/traa family | CK234_00490 | Not Available | Positive | 631610 - 633610 | 76877.1 |
| threonylcarbamoyl-amp synthase | CK234_00491 | Not Available | Positive | 633617 - 634231 | 23089.2 |
| small-conductance mechanosensitive channel | CK234_00492 | Not Available | Positive | 634280 - 635113 | 30653.8 |
| flavo-diiron protein fpra1 | CK234_00493 | Not Available | Negative | 635209 - 636396 | 44710.8 |
| radical sam protein | CK234_00494 | Not Available | Negative | 636412 - 637338 | 35539.8 |
| prolyl tripeptidyl peptidase precursor | CK234_00495 | Not Available | Positive | 637425 - 639626 | 83440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

