Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | CK234_00476 | Not Available | Negative | 607096 - 609930 | 108309.0 |
| putative tricorn protease | CK234_00477 | Not Available | Negative | 610229 - 613453 | 120701.0 |
| ecf rna polymerase sigma-e factor | CK234_00478 | Not Available | Positive | 613632 - 614219 | 22777.2 |
| protein of unknown function (duf4974) | CK234_00479 | Not Available | Positive | 614308 - 615318 | 38678.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00480 | Not Available | Positive | 615383 - 618910 | 131487.0 |
| susd family protein | CK234_00481 | Not Available | Positive | 618932 - 620854 | 73144.0 |
| arylsulfatase | CK234_00482 | Not Available | Positive | 620949 - 622370 | 53009.9 |
| arylsulfatase precursor | CK234_00483 | Not Available | Positive | 622481 - 624007 | 57773.4 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00484 | Not Available | Negative | 625427 - 626983 | 60100.6 |
| fecr protein | CK234_00485 | Not Available | Negative | 626993 - 627847 | 32355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

