Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | CK234_00015 | Not Available | Negative | 25225 - 26304 | 40983.1 |
| carboxypeptidase regulatory-like domain protein | CK234_00016 | Not Available | Negative | 26332 - 27558 | 43659.7 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_00017 | Not Available | Negative | 27586 - 28803 | 46069.2 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_00018 | Not Available | Negative | 28808 - 29536 | 27216.0 |
| putative glycosyltransferase | CK234_00019 | Not Available | Negative | 29533 - 30351 | 30937.9 |
| tigr00661-family protein containing an uncharacterized domain | CK234_00020 | Not Available | Negative | 30377 - 30850 | 18235.1 |
| oligosaccharide biosynthesis protein alg14 like protein | CK234_00021 | Not Available | Negative | 30847 - 31314 | 17464.8 |
| putative acetyltransferase | CK234_00022 | Not Available | Negative | 31321 - 31881 | 21134.6 |
| mannosylfructose-phosphate synthase | CK234_00023 | Not Available | Negative | 31874 - 33019 | 43826.4 |
| putative polysaccharide pyruvyl transferase, csab-like | CK234_00024 | Not Available | Negative | 33020 - 34135 | 43064.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

