Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aaa-atpase | CK234_00446 | Not Available | Positive | 550844 - 552571 | 67898.8 |
| protein of unknown function (duf1593) | CK234_00447 | Not Available | Negative | 552620 - 553975 | 51247.5 |
| pectate lyase, pela/pel-15e family | CK234_00448 | Not Available | Negative | 553992 - 556133 | 81656.3 |
| prolyl tripeptidyl peptidase precursor | CK234_00449 | Not Available | Negative | 556373 - 558616 | 85658.8 |
| non-reducing end beta-l-arabinofuranosidase | CK234_00450 | Not Available | Negative | 558628 - 561033 | 89696.0 |
| arabinoxylan arabinofuranohydrolase precursor | CK234_00451 | Not Available | Negative | 561104 - 563506 | 89938.1 |
| retaining alpha-galactosidase precursor | CK234_00452 | Not Available | Negative | 563543 - 566266 | 103263.0 |
| protein of unknown function (duf4859) | CK234_00453 | Not Available | Negative | 566465 - 568729 | 84424.6 |
| protein of unknown function (duf4859) | CK234_00454 | Not Available | Negative | 568985 - 569995 | 36202.2 |
| susd family protein | CK234_00455 | Not Available | Negative | 570027 - 571706 | 63702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

