Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | CK234_00426 | Not Available | Positive | 527286 - 528554 | 45611.1 |
| hypothetical protein | CK234_00427 | Not Available | Positive | 528603 - 529508 | 34771.5 |
| putative inner membrane protein, yqaa-like | CK234_00428 | Not Available | Positive | 529484 - 529951 | 17015.3 |
| putative trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein, mnmc-like | CK234_00429 | Not Available | Positive | 529956 - 530639 | 26006.9 |
| hypothetical protein | CK234_00430 | Not Available | Negative | 530992 - 534000 | 110570.0 |
| ysirk-targeted surface antigen transcriptional regulator | CK234_00431 | Not Available | Negative | 534058 - 534555 | 19135.2 |
| hypothetical protein | CK234_00432 | Not Available | Positive | 535051 - 535224 | 6724.46 |
| manganese abc transporter substrate-binding lipoprotein precursor | CK234_00433 | Not Available | Positive | 535230 - 536135 | 34020.5 |
| putative high-affinity zinc uptake system atp-binding protein, znuc-like | CK234_00434 | Not Available | Positive | 536145 - 536912 | 28725.7 |
| protein of unknown function (duf2723) | CK234_00435 | Not Available | Positive | 537373 - 540777 | 129187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

