Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00409 | CK234_00416 | Not Available | Positive | 514221 - 515210 | Not Available |
| putative auto-transporter adhesin, head gin domain | CK234_00417 | Not Available | Negative | 515306 - 516157 | 29091.1 |
| pap2 superfamily protein | CK234_00418 | Not Available | Negative | 516334 - 517311 | 37786.7 |
| gdp-6-deoxy-d-mannose reductase | CK234_00419 | Not Available | Negative | 517302 - 518348 | 40078.3 |
| putative ferrous-iron efflux pump, fief-like | CK234_00420 | Not Available | Negative | 518359 - 519300 | 34496.5 |
| ribonuclease r | CK234_00421 | Not Available | Positive | 519392 - 521539 | 81953.4 |
| serine acetyltransferase | CK234_00422 | Not Available | Positive | 521840 - 522748 | 32799.2 |
| hypothetical protein | CK234_00423 | Not Available | Positive | 522899 - 523090 | 7388.35 |
| ribosomal rna large subunit methyltransferase k/l | CK234_00424 | Not Available | Positive | 523602 - 525050 | 56320.4 |
| prolyl tripeptidyl peptidase precursor | CK234_00425 | Not Available | Positive | 525057 - 527270 | 83623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

