Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoteichoic acid synthase 2 | CK234_00406 | Not Available | Positive | 497658 - 499685 | 77422.9 |
| putative prophage cps-53-like gactoprenol glucosyl transferase | CK234_00407 | Not Available | Negative | 499716 - 500681 | 37281.4 |
| gtra-like protein | CK234_00408 | Not Available | Negative | 500700 - 501074 | 14231.0 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | CK234_00409 | Not Available | Positive | 501161 - 502885 | 65330.9 |
| lipoteichoic acid synthase | CK234_00410 | Not Available | Negative | 502969 - 504795 | 68080.2 |
| ribonuclease h | CK234_00411 | Not Available | Negative | 504811 - 505437 | 23847.5 |
| arginine--trna ligase | CK234_00412 | Not Available | Negative | 505438 - 507258 | 68031.7 |
| tonb-linked outer membrane protein, susc/raga family | CK234_00413 | Not Available | Positive | 507868 - 510954 | 114210.0 |
| starch-binding associating with outer membrane | CK234_00414 | Not Available | Positive | 510970 - 512520 | 58695.9 |
| putative protease, yhbu precursor-like | CK234_00415 | Not Available | Negative | 512808 - 514070 | 47014.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

