Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | CK234_00395 | Not Available | Positive | 484217 - 485323 | 42924.6 |
| hypothetical protein | CK234_00396 | Not Available | Positive | 485407 - 486123 | 27429.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | CK234_00397 | Not Available | Positive | 486139 - 486891 | 29433.6 |
| galactofuranosyl transferase glft1 | CK234_00398 | Not Available | Positive | 486906 - 487805 | 34450.6 |
| glycosyl transferase family 2 | CK234_00399 | Not Available | Positive | 488033 - 488944 | 35725.8 |
| core-2/i-branching enzyme | CK234_00400 | Not Available | Positive | 488944 - 489837 | 35490.9 |
| galnac-alpha-(1->4)-galnac-alpha-(1->3)- dinacbac-pp-undecaprenol alpha-1,4-n-acetyl-d-galactosaminyltransferase | CK234_00401 | Not Available | Positive | 489834 - 491012 | 45756.5 |
| glycosyl transferase family 2 | CK234_00402 | Not Available | Negative | 492098 - 493030 | 35626.8 |
| putative multidrug export atp-binding/permease protein | CK234_00403 | Not Available | Negative | 493032 - 494870 | 68820.3 |
| putative teichuronic acid biosynthesis glycosyltransferase, tuag-like | CK234_00405 | Not Available | Positive | 496490 - 497479 | 38644.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

