Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainCL10T00C06

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain CL10T00C06 BVCL10_contig0222, whole

Gene Summary

Adenine Count

1420826 bp

Thymine Count

1424215 bp

Guanine Count

1046299 bp

Cytosine Count

1024853 bp

Genome Length

4918368 bp

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative ecf rna polymerase sigma factor, rpoe-likeCK234_00385Not AvailableNegative470103 - 47064821382.9
tonb-linked outer membrane protein, susc/raga familyCK234_00386Not AvailablePositive470969 - 474010112156.0
susd and ragb-like outer membrane lipoproteinCK234_00387Not AvailablePositive474010 - 47571363029.3
putative ecf rna polymerase sigma factor, sige-likeCK234_00388Not AvailablePositive475959 - 47646819967.9
fecr proteinCK234_00389Not AvailablePositive476538 - 47734130911.8
tonb-linked outer membrane protein, susc/raga familyCK234_00390Not AvailablePositive477338 - 479992100786.0
protein of unknown function (duf4249)CK234_00391Not AvailablePositive479999 - 48096436360.1
erythronate-4-phosphate dehydrogenaseCK234_00392Not AvailableNegative481129 - 48215438339.9
putative lipopolysaccharide core heptosyltransferase, rfaq-likeCK234_00393Not AvailablePositive482259 - 48329038600.2
lipid a biosynthesis lauroyl (or palmitoleoyl) acyltransferaseCK234_00394Not AvailablePositive483291 - 48421437581.7

Displaying genes 411 – 420 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.