Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon trak protein | CK234_04078 | Not Available | Positive | 4866050 - 4866673 | 24027.0 |
| hypothetical protein | CK234_04079 | Not Available | Negative | 4867250 - 4867723 | 18872.5 |
| hypothetical protein | CK234_04080 | Not Available | Negative | 4868389 - 4868823 | 16705.8 |
| chaperone of endosialidase | CK234_04081 | Not Available | Positive | 4869186 - 4869833 | 23262.1 |
| hypothetical protein | CK234_04082 | Not Available | Negative | 4872528 - 4872932 | 15303.8 |
| hypothetical protein | CK234_04083 | Not Available | Negative | 4873536 - 4874084 | 20563.4 |
| putative tram recognition site of trad and, trag-like | CK234_04084 | Not Available | Negative | 4874241 - 4875056 | 30681.2 |
| putative tram recognition site of trad and, trag-like | CK234_04085 | Not Available | Negative | 4875144 - 4875959 | 30491.0 |
| hypothetical protein | CK234_04086 | Not Available | Negative | 4876007 - 4876768 | 27760.6 |
| group ii intron, maturase-specific domain | CK234_04087 | Not Available | Positive | 4877874 - 4878473 | 23909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

