Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CK234_04067 | Not Available | Negative | 4853936 - 4854919 | 37569.8 |
| hypothetical protein | CK234_04068 | Not Available | Negative | 4854885 - 4855265 | 14717.3 |
| hypothetical protein | CK234_04069 | Not Available | Positive | 4855472 - 4855819 | 12503.2 |
| fimbrillin-like protein | CK234_04070 | Not Available | Negative | 4855876 - 4856628 | 27104.9 |
| mutator family transposase | CK234_04071 | Not Available | Positive | 4856793 - 4858007 | 46226.5 |
| hypothetical protein | CK234_04073 | Not Available | Negative | 4863357 - 4863554 | 7699.3 |
| single stranded dna-binding protein (ssb) | CK234_04074 | Not Available | Positive | 4863868 - 4864263 | 14787.7 |
| hypothetical protein | CK234_04075 | Not Available | Positive | 4864452 - 4864862 | 15174.9 |
| conjugative transposon trak protein | CK234_04076 | Not Available | Positive | 4864867 - 4865508 | 24584.7 |
| hypothetical protein | CK234_04077 | Not Available | Positive | 4865634 - 4866044 | 15160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

