Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | CK234_04057 | Not Available | Positive | 4840047 - 4840301 | 9698.07 |
| phage gp6-like head-tail connector protein | CK234_04058 | Not Available | Positive | 4840384 - 4840686 | 11370.9 |
| hypothetical protein | CK234_04059 | Not Available | Positive | 4840986 - 4841486 | 18961.7 |
| hypothetical protein | CK234_04060 | Not Available | Negative | 4842314 - 4842505 | 6982.41 |
| replication initiation protein | CK234_04061 | Not Available | Negative | 4842519 - 4843496 | 38642.7 |
| transposase dde domain protein | CK234_04062 | Not Available | Negative | 4846704 - 4847678 | 37280.8 |
| hypothetical protein | CK234_04063 | Not Available | Positive | 4848232 - 4849293 | 39279.2 |
| hypothetical protein | CK234_04064 | Not Available | Positive | 4849686 - 4850747 | 39141.0 |
| sialidase precursor | CK234_04065 | Not Available | Positive | 4851034 - 4852302 | 47635.1 |
| sialidase precursor | CK234_04066 | Not Available | Negative | 4852645 - 4853049 | 15134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

