Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_04027 | Not Available | Negative | 4803490 - 4803798 | 11345.7 |
| hypothetical protein | CK234_04028 | Not Available | Negative | 4803946 - 4805226 | 50110.4 |
| single stranded dna-binding protein (ssb) | CK234_04029 | Not Available | Positive | 4806367 - 4806744 | 14227.7 |
| y4mf family transcriptional regulator | CK234_04030 | Not Available | Positive | 4806971 - 4807279 | 11646.2 |
| hypothetical protein | CK234_04031 | Not Available | Positive | 4808580 - 4808849 | 10425.4 |
| protein of unknown function (duf3791) | CK234_04032 | Not Available | Positive | 4808921 - 4809370 | 17702.2 |
| protein of unknown function (duf3990) | CK234_04033 | Not Available | Positive | 4809367 - 4809846 | 18186.0 |
| hypothetical protein | CK234_04034 | Not Available | Positive | 4809868 - 4810128 | 9998.22 |
| putative toxin, pezt-like | CK234_04035 | Not Available | Positive | 4810115 - 4810969 | 32265.9 |
| integrase core domain protein | CK234_04036 | Not Available | Positive | 4811255 - 4812820 | 60435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

