Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03997 | Not Available | Negative | 4774607 - 4775485 | 33771.8 |
| hypothetical protein | CK234_03998 | Not Available | Negative | 4775482 - 4776087 | 23234.0 |
| phage derived protein gp49-like (duf891) | CK234_03999 | Not Available | Positive | 4776479 - 4776826 | 13691.6 |
| y4mf family transcriptional regulator | CK234_04000 | Not Available | Positive | 4776832 - 4777146 | 11713.1 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CK234_04001 | Not Available | Negative | 4778032 - 4778853 | 31725.3 |
| udp-galactopyranose mutase | CK234_04002 | Not Available | Negative | 4778920 - 4780044 | 43480.5 |
| protein of unknown function (duf4422) | CK234_04003 | Not Available | Negative | 4780086 - 4780862 | 30780.2 |
| hypothetical protein | CK234_04004 | Not Available | Negative | 4780977 - 4781498 | 19581.6 |
| putative hth-type transcriptional activator, rhar-like | CK234_04005 | Not Available | Negative | 4781740 - 4783419 | 65481.4 |
| hypothetical protein | CK234_04006 | Not Available | Positive | 4783694 - 4784272 | 21509.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

