Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_00365 | Not Available | Positive | 443050 - 443550 | 19542.0 |
| putative tir-like domain (duf1863) protein | CK234_00366 | Not Available | Positive | 443566 - 444051 | 18557.3 |
| hypothetical protein | CK234_00367 | Not Available | Positive | 444053 - 444694 | 24775.2 |
| protein of unknown function (duf3108) | CK234_00368 | Not Available | Negative | 445245 - 446054 | 31356.0 |
| bacterial ig-like domain protein | CK234_00369 | Not Available | Negative | 446051 - 447973 | 73369.4 |
| gh3 auxin-responsive promoter | CK234_00370 | Not Available | Negative | 447978 - 449483 | 57485.0 |
| 6-phosphofructokinase 1 | CK234_00371 | Not Available | Positive | 449631 - 450641 | 35787.3 |
| putative sensor histidine kinase, tmos-like | CK234_00372 | Not Available | Negative | 450651 - 454718 | 154606.0 |
| ferrienterobactin receptor precursor | CK234_00373 | Not Available | Positive | 454903 - 458070 | 118083.0 |
| susd family protein | CK234_00374 | Not Available | Positive | 458083 - 460131 | 77637.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

