Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon tram protein | CK234_03957 | Not Available | Positive | 4730111 - 4731322 | 45449.1 |
| hypothetical protein | CK234_03958 | Not Available | Positive | 4731373 - 4731531 | 5861.52 |
| hypothetical protein | CK234_03959 | Not Available | Negative | 4732058 - 4732417 | 13929.7 |
| hypothetical protein | CK234_03960 | Not Available | Positive | 4732627 - 4732812 | 6428.26 |
| hypothetical protein | CK234_03961 | Not Available | Positive | 4732894 - 4733076 | 6442.35 |
| putative antilisterial bacteriocin subtilosin biosynthesis protein, alba-like | CK234_03962 | Not Available | Positive | 4733179 - 4734480 | 50254.5 |
| outer membrane protein beta-barrel family protein | CK234_03963 | Not Available | Positive | 4734684 - 4736990 | 87008.3 |
| nhlm bacteriocin system abc transporter, peptidase/atp-binding protein | CK234_03964 | Not Available | Negative | 4737009 - 4737596 | 23231.6 |
| mannose-1-phosphate guanylyltransferase 1 | CK234_03965 | Not Available | Negative | 4737977 - 4739020 | 39523.2 |
| Trna-leu | Not Available | Not Available | Positive | 4739205 - 4739291 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

