Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03947 | Not Available | Negative | 4723905 - 4724138 | 9090.76 |
| hypothetical protein | CK234_03948 | Not Available | Negative | 4724213 - 4724506 | 11440.8 |
| phage major tail protein, tp901-1 family | CK234_03949 | Not Available | Negative | 4724593 - 4725000 | 14195.6 |
| putative conjugation system atpase, trag family-like | CK234_03950 | Not Available | Positive | 4725058 - 4725678 | 23782.4 |
| hypothetical protein | CK234_03951 | Not Available | Positive | 4725672 - 4726418 | 27997.1 |
| hypothetical protein | CK234_03952 | Not Available | Positive | 4726438 - 4727133 | 25931.3 |
| protein of unknown function (duf5045) | CK234_03953 | Not Available | Positive | 4727123 - 4727809 | 27082.4 |
| conjugative transposon traj protein | CK234_03954 | Not Available | Positive | 4727870 - 4728997 | 40638.2 |
| conjugative transposon trak protein | CK234_03955 | Not Available | Positive | 4729017 - 4729613 | 22911.7 |
| hypothetical protein | CK234_03956 | Not Available | Positive | 4729626 - 4730114 | 18411.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

