Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative carbohydrate metabolism domain protein | CK234_03937 | Not Available | Negative | 4711862 - 4712821 | 35488.6 |
| putative cell division protein, ftsn-like | CK234_03938 | Not Available | Negative | 4712947 - 4713444 | 17961.2 |
| ytxh-like protein | CK234_03939 | Not Available | Positive | 4713655 - 4713852 | 6773.24 |
| putative holin superfamily iii related protein | CK234_03940 | Not Available | Positive | 4713930 - 4714286 | 13343.2 |
| hypothetical protein | CK234_03941 | Not Available | Positive | 4714289 - 4714555 | 10057.5 |
| putative tricorn protease | CK234_03942 | Not Available | Positive | 4714585 - 4717845 | 122975.0 |
| hypothetical protein | CK234_03943 | Not Available | Negative | 4720048 - 4721562 | 58652.8 |
| hypothetical protein | CK234_03944 | Not Available | Negative | 4721559 - 4722146 | 20675.5 |
| hypothetical protein | CK234_03945 | Not Available | Negative | 4722143 - 4722304 | 5800.1 |
| hypothetical protein | CK234_03946 | Not Available | Negative | 4722301 - 4723902 | 54045.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

