Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amidoligase enzyme | CK234_03917 | Not Available | Negative | 4687941 - 4688870 | 35385.5 |
| hypothetical protein | CK234_03918 | Not Available | Negative | 4690625 - 4690819 | 7349.1 |
| pneumolysin | CK234_03919 | Not Available | Negative | 4690893 - 4691945 | 39144.5 |
| listeriolysin o precursor | CK234_03920 | Not Available | Negative | 4691958 - 4693505 | 59922.6 |
| thiol-activated cytolysin | CK234_03921 | Not Available | Negative | 4693518 - 4694378 | 32446.3 |
| hypothetical protein | CK234_03922 | Not Available | Negative | 4694408 - 4694980 | 22589.2 |
| protein of unknown function (duf3244) | CK234_03923 | Not Available | Negative | 4694992 - 4695369 | 14472.5 |
| tetratricopeptide repeat protein | CK234_03924 | Not Available | Negative | 4695546 - 4697423 | 72375.5 |
| hypothetical protein | CK234_03925 | Not Available | Negative | 4697679 - 4697843 | 5983.36 |
| hypothetical protein | CK234_03926 | Not Available | Negative | 4697931 - 4698155 | 9082.56 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

