Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf721) | CK234_03887 | Not Available | Negative | 4666987 - 4667277 | 11221.9 |
| putative dna replication and repair protein, recf-like | CK234_03888 | Not Available | Negative | 4667274 - 4668389 | 42967.7 |
| tetratricopeptide repeat protein | CK234_03889 | Not Available | Positive | 4668542 - 4669219 | 24504.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | CK234_03890 | Not Available | Positive | 4669312 - 4669818 | 18128.7 |
| Trna-tyr | Not Available | Not Available | Positive | 4669930 - 4670015 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4670022 - 4670097 | Not Available |
| quercetin 2,3-dioxygenase | CK234_03893 | Not Available | Positive | 4670234 - 4670938 | 26517.3 |
| hypothetical protein | CK234_03894 | Not Available | Negative | 4671161 - 4671454 | 11293.8 |
| exodeoxyribonuclease | CK234_03895 | Not Available | Negative | 4671611 - 4672369 | 29809.1 |
| protein translocase, secg subunit | CK234_03896 | Not Available | Negative | 4672530 - 4672895 | 12571.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

