Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acidobacterial duplicated orphan permease | CK234_03867 | Not Available | Positive | 4641680 - 4642444 | 29576.7 |
| Trna-asn | Not Available | Not Available | Positive | 4642920 - 4642993 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 4643019 - 4643092 | Not Available |
| putative sugar kinase, ydjh-like | CK234_03870 | Not Available | Positive | 4643173 - 4644159 | 35280.9 |
| putative ctpa-like serine protease | CK234_03871 | Not Available | Positive | 4644233 - 4645897 | 61836.0 |
| outer membrane protein beta-barrel family protein | CK234_03872 | Not Available | Negative | 4645963 - 4648260 | 87685.8 |
| putative sensor protein kinase, walk-like | CK234_03873 | Not Available | Positive | 4648382 - 4649767 | 53366.8 |
| putative alkaline phosphatase synthesis transcriptional regulatory protein, phop-like | CK234_03874 | Not Available | Positive | 4649792 - 4650493 | 26532.4 |
| v-type atp synthase beta chain | CK234_03875 | Not Available | Positive | 4650701 - 4650940 | 9238.87 |
| h(+)-transporting atp synthase, vacuolar type, subunit d | CK234_03876 | Not Available | Positive | 4650955 - 4651560 | 23447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

