Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon traj protein | CK234_03857 | Not Available | Negative | 4631240 - 4632262 | 37691.8 |
| hypothetical protein | CK234_03858 | Not Available | Negative | 4632255 - 4632911 | 25994.3 |
| hypothetical protein | CK234_03859 | Not Available | Negative | 4632913 - 4633587 | 25473.4 |
| putative conjugation system atpase, trag family-like | CK234_03860 | Not Available | Negative | 4633598 - 4634143 | 21112.3 |
| Trna-pro | Not Available | Not Available | Positive | 4634739 - 4634813 | Not Available |
| putative sensor protein, zras-like | CK234_03862 | Not Available | Negative | 4634973 - 4636304 | 50551.9 |
| putative transcriptional regulatory protein, zrar-like | CK234_03863 | Not Available | Negative | 4636301 - 4637668 | 51877.1 |
| putative beta-lactamase, hcpc precursor-like | CK234_03864 | Not Available | Positive | 4637892 - 4638815 | 34904.6 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_03865 | Not Available | Positive | 4638866 - 4640335 | 55871.3 |
| rnd family efflux transporter, mfp subunit | CK234_03866 | Not Available | Positive | 4640419 - 4641669 | 48108.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

