Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soj-like sporulation initiation inhibitor protein | CK234_03847 | Not Available | Positive | 4624204 - 4624956 | 27492.6 |
| hypothetical protein | CK234_03848 | Not Available | Positive | 4624962 - 4625306 | 13051.7 |
| hypothetical protein | CK234_03849 | Not Available | Positive | 4625433 - 4625897 | 17047.6 |
| oprf precursor-like outer membrane porin | CK234_03850 | Not Available | Negative | 4626389 - 4627030 | 23835.2 |
| hypothetical protein | CK234_03851 | Not Available | Negative | 4627033 - 4627692 | 23717.9 |
| hypothetical protein | CK234_03852 | Not Available | Negative | 4627695 - 4628198 | 19086.8 |
| conjugative transposon tran protein (tigr03780) | CK234_03853 | Not Available | Negative | 4628211 - 4629050 | 32360.3 |
| conjugative transposon tram protein | CK234_03854 | Not Available | Negative | 4629052 - 4630158 | 41651.7 |
| hypothetical protein | CK234_03855 | Not Available | Negative | 4630162 - 4630593 | 16668.7 |
| conjugative transposon trak protein | CK234_03856 | Not Available | Negative | 4630593 - 4631207 | 23412.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

