Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoesterase | CK234_03837 | Not Available | Negative | 4617327 - 4618088 | 29475.6 |
| hypothetical protein | CK234_03838 | Not Available | Negative | 4618085 - 4618870 | 29701.3 |
| hypothetical protein | CK234_03839 | Not Available | Negative | 4618858 - 4619829 | 36937.0 |
| hypothetical protein | CK234_03840 | Not Available | Positive | 4620242 - 4620715 | 18086.9 |
| protein of unknown function (duf4134) | CK234_03841 | Not Available | Positive | 4620696 - 4620962 | 9569.12 |
| putative group ii intron-encoded protein, ltra-like | CK234_03842 | Not Available | Positive | 4620959 - 4621756 | 30235.4 |
| hypothetical protein | CK234_03843 | Not Available | Positive | 4621949 - 4622287 | 13480.4 |
| toprim-like protein | CK234_03844 | Not Available | Positive | 4622416 - 4622826 | 15645.8 |
| hypothetical protein | CK234_03845 | Not Available | Positive | 4623067 - 4623417 | 13835.7 |
| hypothetical protein | CK234_03846 | Not Available | Positive | 4623436 - 4624017 | 22648.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

