Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron hydrogenase 1 | CK234_03827 | Not Available | Positive | 4602455 - 4604206 | 65294.0 |
| biotin synthase | CK234_03828 | Not Available | Positive | 4604215 - 4605249 | 38858.7 |
| 2-iminoacetate synthase | CK234_03829 | Not Available | Positive | 4605262 - 4606680 | 53347.0 |
| der-like gtpase | CK234_03830 | Not Available | Positive | 4606744 - 4607934 | 43955.6 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 4608424 - 4608818 | Not Available |
| 6-phosphogluconolactonase | CK234_03832 | Not Available | Positive | 4608974 - 4610125 | 42144.0 |
| putative mannose-6-phosphate isomerase, gmuf-like | CK234_03833 | Not Available | Negative | 4610217 - 4611188 | 36186.5 |
| hypothetical protein | CK234_03834 | Not Available | Negative | 4611302 - 4612909 | 57856.1 |
| tonb-dependent receptor | CK234_03835 | Not Available | Negative | 4612916 - 4615678 | 104361.0 |
| low specificity l-threonine aldolase | CK234_03836 | Not Available | Positive | 4615847 - 4616863 | 37832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

