Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03817 | Not Available | Positive | 4594516 - 4594716 | 7464.9 |
| helix-turn-helix domain protein | CK234_03818 | Not Available | Negative | 4594616 - 4594939 | 12499.9 |
| helix-turn-helix domain protein | CK234_03819 | Not Available | Negative | 4595264 - 4595575 | 12063.6 |
| protein of unknown function (duf3408) | CK234_03820 | Not Available | Positive | 4596053 - 4596547 | 18456.6 |
| hypothetical protein | CK234_03821 | Not Available | Positive | 4596775 - 4597146 | 13642.9 |
| relaxase/mobilization nuclease domain protein | CK234_03822 | Not Available | Positive | 4597151 - 4598077 | 35116.1 |
| hypothetical protein | CK234_03823 | Not Available | Negative | 4598236 - 4598751 | 18750.5 |
| Trna-thr | Not Available | Not Available | Positive | 4600088 - 4600161 | Not Available |
| grol-like chaperonin | CK234_03825 | Not Available | Negative | 4600409 - 4602046 | 58147.1 |
| gros-like chaperonin | CK234_03826 | Not Available | Negative | 4602087 - 4602359 | 9740.92 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

