Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | CK234_03807 | Not Available | Negative | 4582348 - 4583409 | 39089.9 |
| 2-isopropylmalate synthase | CK234_03808 | Not Available | Negative | 4583503 - 4585050 | 57810.4 |
| 3-isopropylmalate dehydratase small subunit | CK234_03809 | Not Available | Negative | 4585029 - 4585625 | 22479.6 |
| 3-isopropylmalate dehydratase large subunit | CK234_03810 | Not Available | Negative | 4585639 - 4587021 | 50049.1 |
| 2-isopropylmalate synthase | CK234_03811 | Not Available | Negative | 4587039 - 4588535 | 54478.1 |
| putative tyrosine recombinase, xerd-like | CK234_03812 | Not Available | Positive | 4589852 - 4591099 | 47824.1 |
| hypothetical protein | CK234_03813 | Not Available | Positive | 4591104 - 4591625 | 20285.2 |
| kila-n domain protein | CK234_03814 | Not Available | Positive | 4591592 - 4592395 | 30740.0 |
| hypothetical protein | CK234_03815 | Not Available | Positive | 4593102 - 4593662 | 22142.5 |
| hypothetical protein | CK234_03816 | Not Available | Positive | 4593701 - 4594093 | 14916.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

