Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_03797 | Not Available | Negative | 4572654 - 4572812 | 6036.2 |
| putative dna primase, trac-like | CK234_03798 | Not Available | Negative | 4573915 - 4574925 | 39113.1 |
| hin-like dna-invertase | CK234_03799 | Not Available | Negative | 4575349 - 4575942 | 22677.6 |
| hypothetical protein | CK234_03800 | Not Available | Positive | 4576088 - 4576429 | 13040.2 |
| protein of unknown function (duf4134) | CK234_03801 | Not Available | Positive | 4576449 - 4576763 | 11030.9 |
| hypothetical protein | CK234_03802 | Not Available | Positive | 4576765 - 4577064 | 11136.2 |
| putative conjugation system atpase, trag family-like | CK234_03803 | Not Available | Positive | 4577070 - 4579346 | 88547.2 |
| putative pep-cterm system tpr-repeat lipoprotein | CK234_03804 | Not Available | Negative | 4579545 - 4580399 | 32554.4 |
| peptide methionine sulfoxide reductase msra 3 | CK234_03805 | Not Available | Positive | 4580517 - 4581002 | 18625.0 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_03806 | Not Available | Negative | 4581071 - 4582216 | 42890.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

