Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiamine biosynthesis lipoprotein, apbe precursor-like | CK234_03777 | Not Available | Positive | 4549625 - 4550641 | 37820.5 |
| putative membrane protein, marc family-like | CK234_03778 | Not Available | Negative | 4550800 - 4551402 | 22154.0 |
| crp-like helix-turn-helix domain protein | CK234_03779 | Not Available | Positive | 4551590 - 4552267 | 26004.6 |
| dcp-like peptidyl-dipeptidase | CK234_03780 | Not Available | Positive | 4552425 - 4554467 | 77820.4 |
| protein of unknown function (duf4847) | CK234_03781 | Not Available | Positive | 4554481 - 4554975 | 18544.7 |
| pp_03716 | CK234_03782 | Not Available | Positive | 4554980 - 4555414 | Not Available |
| putative carboxy-terminal processing protease, ctpb precursor-like | CK234_03783 | Not Available | Positive | 4555429 - 4557177 | 64897.7 |
| putative 5-formyltetrahydrofolate cyclo-ligase | CK234_03784 | Not Available | Positive | 4557170 - 4557631 | 17803.3 |
| pantothenate kinase, eukaryotic/staphyloccocal type | CK234_03785 | Not Available | Negative | 4558007 - 4558831 | 29299.7 |
| carbohydrate esterase, sialic acid-specific acetylesterase | CK234_03786 | Not Available | Negative | 4558909 - 4560798 | 71615.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

