Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mcrbc-like 5-methylcytosine restriction system component | CK234_03767 | Not Available | Positive | 4539914 - 4541251 | 51612.7 |
| hypothetical protein | CK234_03768 | Not Available | Positive | 4542430 - 4543065 | 24043.0 |
| hypothetical protein | CK234_03769 | Not Available | Positive | 4543254 - 4543703 | 17270.7 |
| putative atp-dependent zinc metalloprotease, ftsh-like | CK234_03770 | Not Available | Positive | 4543736 - 4545307 | 59630.8 |
| Trna-thr | Not Available | Not Available | Positive | 4546013 - 4546086 | Not Available |
| protein of unknown function (duf4199) | CK234_03772 | Not Available | Positive | 4546346 - 4546879 | 20538.6 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | CK234_03773 | Not Available | Positive | 4546883 - 4547836 | 36346.1 |
| hypothetical protein | CK234_03774 | Not Available | Positive | 4547892 - 4548386 | 18795.1 |
| hypothetical protein | CK234_03775 | Not Available | Positive | 4548334 - 4549035 | 26539.9 |
| putative manganese efflux pump, mntp-like | CK234_03776 | Not Available | Positive | 4549039 - 4549611 | 21224.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

