Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphate regulon transcriptional regulatory protein, phob-like | CK234_03757 | Not Available | Negative | 4527318 - 4528280 | 37660.8 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_03758 | Not Available | Positive | 4528462 - 4529661 | 46131.1 |
| uronate isomerase | CK234_03759 | Not Available | Negative | 4529750 - 4531156 | 54309.7 |
| altronate oxidoreductase | CK234_03760 | Not Available | Positive | 4531482 - 4532921 | 53907.1 |
| hypothetical protein | CK234_03761 | Not Available | Positive | 4533023 - 4533436 | 15741.7 |
| hypothetical protein | CK234_03762 | Not Available | Negative | 4533640 - 4535094 | 56060.2 |
| y4mf family transcriptional regulator | CK234_03763 | Not Available | Negative | 4535390 - 4535695 | 11362.3 |
| atpase domain predominantly from archaea | CK234_03764 | Not Available | Positive | 4536070 - 4537203 | 43311.9 |
| hypothetical protein | CK234_03765 | Not Available | Positive | 4537211 - 4537603 | 15337.6 |
| 5-methylcytosine-specific restriction enzyme b | CK234_03766 | Not Available | Positive | 4538280 - 4539911 | 62467.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

